Installing FSLeyes Plugin¶
FSLeyes is a neuroimaging viewer, created
as part of the FSL software package. We have created a plugin for Shimming Toolbox
to
integrate with FSLeyes
, which means that our software can be loaded and used with their
viewer.
We have bundled our plugin installer with FSLeyes
, which means you don’t have to install it
yourself. If you do have FSLeyes
installed, don’t worry - it won’t interfere.
To install, first clone the repo:
git clone https://github.com/shimming-toolbox/fsleyes-plugin-shimming-toolbox.git
Next, run the installer:
cd fsleyes-plugin-shimming-toolbox
make install
You will be prompted to source your *.shrc
file. For example:
source ~/.bashrc
Now, you can launch FSLeyes
with our plugin from any environment:
shimming-toolbox
To launch our plugin, go to:
Settings --> OrthoView --> Shimming Toolbox
The plugin should open as a panel.