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Overview

  • Welcome to shimming-toolbox!
    • Features
    • Installation
    • Usage

User Section

  • Installation
    • Dependencies
    • Installation
    • Test the Installation
      • Comprehensive Test
      • Testing subsets of soft dependencies
    • For Developers
  • Tutorials
    • Dynamic Shimming
      • Download test data
      • Launch the plugin
      • Create a Fieldmap
      • Create a Mask
      • Dynamic shimming
    • Static B1+ shimming
      • Download test data
      • Convert DICOM to NIfTI
      • Create a Mask
      • Static B1+ shimming
    • Shell scripts
      • demo_realtime_shimming.sh
      • B1+ shimming
  • Command Line Tools
    • Fieldmapping
      • st_prepare_fieldmap
    • Shimming
      • st_b0shim
        • dynamic-cli
        • realtime-cli
        • realtime-shim-cli
      • st_b1shim
    • Masking
      • st_mask
        • box
        • rect
        • sct
        • threshold
    • File Conversion
      • st_dicom_to_nifti
    • Image manipulation
      • st_image
        • concat
        • logical-and
      • st_maths
        • mean
    • Miscellaneous
      • st_download_data
    • System Tools
      • st_check_dependencies
      • st_dump_env_info
  • Help

Developer Section

  • Contributing to shimming-toolbox
    • Introduction
    • Opening an issue
      • Before Submitting a New Issue
      • Submitting an Issue
        • Issue Examples
    • Opening a Branch
    • Developing
      • Pre-commit checks
      • Conflicts
      • Code style
      • Documentation and docstrings
      • Testing
      • Licensing
    • Committing
      • Commit Titles
      • Commit Sequences
    • Submitting a Pull Request
      • PR Labels
      • Work in progress
      • Continuous Integration
      • Reviewers
      • Merging your PR
    • Versioning
  • Contributors
  • API Reference
    • Fieldmapping
    • Masking
    • Coils
    • Shim
    • Optimizer
    • Image manipulation
    • Numerical model
    • Miscellaneous

About

  • License and Warranty
shimming-toolbox
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  • Contributors
  • Edit on GitHub

Contributors

List of contributors.

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© Copyright 2020, NeuroPoly Lab, Polytechnique Montreal. Revision 808df3b7.

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